Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm13823-201ENSMUST00000119930 345 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm27989-201ENSMUST00000184721 107 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm2451-201ENSMUST00000199447 999 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm10290-201ENSMUST00000200451 999 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sh3rf2Q8BZT2 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sh3rf2Q8BZT2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Gm12428-201ENSMUST00000119844 727 ntBASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sh3rf2Q8BZT2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sh3rf2Q8BZT2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms