Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Smg1Q8BKX6 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.28□□□□□ -0.44
Smg1Q8BKX6 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gm43118-201ENSMUST00000199149 775 ntBASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gm10012-201ENSMUST00000078252 192 ntBASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gm29199-201ENSMUST00000187766 775 ntBASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Smg1Q8BKX6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smg1Q8BKX6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smg1Q8BKX6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.26□□□□□ -0.45
Smg1Q8BKX6 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Mir5132-201ENSMUST00000175166 71 ntBASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smg1Q8BKX6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms