Protein–RNA interactions for Protein: Q8BKW4

Zcchc4, Zinc finger CCHC domain-containing protein 4, mousemouse

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc4Q8BKW4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc4Q8BKW4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc4Q8BKW4 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc4Q8BKW4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Zcchc4Q8BKW4 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Zcchc4Q8BKW4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Zcchc4Q8BKW4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Zcchc4Q8BKW4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms