Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdh20Q8BIZ0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Grk6-207ENSMUST00000225925 2769 ntBASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.43□□□□□ -0.1
Pcdh20Q8BIZ0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gm18489-201ENSMUST00000172565 551 ntBASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gm27525-201ENSMUST00000184465 107 ntBASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gm7787-201ENSMUST00000216858 688 ntBASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pcdh20Q8BIZ0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pcdh20Q8BIZ0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms