Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn3bQ8BHK2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Gm43799-201ENSMUST00000201845 579 ntBASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Scn3bQ8BHK2 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Gm44454-201ENSMUST00000198541 138 ntBASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Gm43767-201ENSMUST00000198933 381 ntBASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn3bQ8BHK2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Scn3bQ8BHK2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Scn3bQ8BHK2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Scn3bQ8BHK2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Scn3bQ8BHK2 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.71□□□□□ -0.22
Scn3bQ8BHK2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Scn3bQ8BHK2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms