Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.02■□□□□ -0
Nrde2Q80XC6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Nrde2Q80XC6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 Gm6415-201ENSMUST00000118488 348 ntBASIC15.02■□□□□ -0
Nrde2Q80XC6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.02■□□□□ -0
Nrde2Q80XC6 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.02■□□□□ -0
Nrde2Q80XC6 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.02■□□□□ -0
Nrde2Q80XC6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Nrde2Q80XC6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Nrde2Q80XC6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15□□□□□ -0.01
Nrde2Q80XC6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nrde2Q80XC6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Nrde2Q80XC6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15□□□□□ -0.01
Nrde2Q80XC6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Nrde2Q80XC6 Gm27989-201ENSMUST00000184721 107 ntBASIC15□□□□□ -0.01
Nrde2Q80XC6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15□□□□□ -0.01
Nrde2Q80XC6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15□□□□□ -0.01
Nrde2Q80XC6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Nrde2Q80XC6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Nrde2Q80XC6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Gm2810-201ENSMUST00000118681 990 ntBASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Gm15693-201ENSMUST00000120470 637 ntBASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Nrde2Q80XC6 Gm27618-201ENSMUST00000183671 60 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms