Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3tc2Q80VA5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3tc2Q80VA5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3tc2Q80VA5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3tc2Q80VA5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3tc2Q80VA5 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sh3tc2Q80VA5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.08■□□□□ 0.17
Sh3tc2Q80VA5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3tc2Q80VA5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sh3tc2Q80VA5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Gm7488-201ENSMUST00000117148 684 ntBASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Sh3tc2Q80VA5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Gm15487-201ENSMUST00000122373 465 ntBASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sh3tc2Q80VA5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 BC037039-201ENSMUST00000192003 2205 ntBASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Gm18049-201ENSMUST00000208909 581 ntBASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh3tc2Q80VA5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm25144-201ENSMUST00000179561 110 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm25352-201ENSMUST00000179815 110 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm28630-201ENSMUST00000187806 498 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gm9063-201ENSMUST00000223299 582 ntBASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sh3tc2Q80VA5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms