Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.84□□□□□ -0.03
Usp8Q80U87 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Usp8Q80U87 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Usp8Q80U87 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.84□□□□□ -0.03
Usp8Q80U87 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.84□□□□□ -0.03
Usp8Q80U87 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Usp8Q80U87 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp8Q80U87 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.83□□□□□ -0.03
Usp8Q80U87 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp8Q80U87 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Usp8Q80U87 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Usp8Q80U87 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Usp8Q80U87 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Usp8Q80U87 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp8Q80U87 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Gm12134-201ENSMUST00000122109 520 ntBASIC14.83□□□□□ -0.04
Usp8Q80U87 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.83□□□□□ -0.04
Usp8Q80U87 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.83□□□□□ -0.04
Usp8Q80U87 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.83□□□□□ -0.04
Usp8Q80U87 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Usp8Q80U87 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.83□□□□□ -0.04
Usp8Q80U87 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Usp8Q80U87 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Usp8Q80U87 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Gm5682-201ENSMUST00000173402 505 ntBASIC14.82□□□□□ -0.04
Usp8Q80U87 Gm10499-201ENSMUST00000174094 934 ntBASIC14.82□□□□□ -0.04
Usp8Q80U87 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.82□□□□□ -0.04
Usp8Q80U87 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.82□□□□□ -0.04
Usp8Q80U87 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.82□□□□□ -0.04
Usp8Q80U87 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.82□□□□□ -0.04
Usp8Q80U87 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Usp8Q80U87 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Usp8Q80U87 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Celf4-206ENSMUST00000224553 1729 ntBASIC14.81□□□□□ -0.04
Usp8Q80U87 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Gm6376-201ENSMUST00000209407 580 ntBASIC14.81□□□□□ -0.04
Usp8Q80U87 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Usp8Q80U87 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Usp8Q80U87 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Usp8Q80U87 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms