Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh19Q80TF3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Gm18049-201ENSMUST00000208909 581 ntBASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Gm5779-201ENSMUST00000218467 910 ntBASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdh19Q80TF3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdh19Q80TF3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdh19Q80TF3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Gm8410-201ENSMUST00000117225 605 ntBASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Pcdh19Q80TF3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms