Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm5864-201ENSMUST00000202263 970 ntBASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ctdp1Q7TSG2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Gm13884-201ENSMUST00000118103 829 ntBASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Gm18195-201ENSMUST00000207604 706 ntBASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Gm7506-201ENSMUST00000207758 815 ntBASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ctdp1Q7TSG2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Gm4459-201ENSMUST00000118750 468 ntBASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Gm8318-201ENSMUST00000182954 872 ntBASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Mzt1-203ENSMUST00000227948 952 ntBASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Ctdp1Q7TSG2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ctdp1Q7TSG2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ctdp1Q7TSG2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ctdp1Q7TSG2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms