Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.19□□□□□ -0.14
Rfx4Q7TNK1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rfx4Q7TNK1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rfx4Q7TNK1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Gm4459-201ENSMUST00000118750 468 ntBASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rfx4Q7TNK1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms