Protein–RNA interactions for Protein: Q6X893

Slc44a1, Choline transporter-like protein 1, mousemouse

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a1Q6X893 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc44a1Q6X893 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Slc44a1Q6X893 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm22065-201ENSMUST00000103753 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm22066-201ENSMUST00000103761 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24932-201ENSMUST00000103763 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24115-201ENSMUST00000103799 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm22190-201ENSMUST00000103827 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm22191-201ENSMUST00000103831 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24721-201ENSMUST00000103849 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm28018-201ENSMUST00000103869 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm26399-201ENSMUST00000103937 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm25349-201ENSMUST00000177728 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm23616-201ENSMUST00000177797 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm25871-201ENSMUST00000177816 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24752-201ENSMUST00000178240 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24496-201ENSMUST00000178287 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm25649-201ENSMUST00000178476 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm25548-201ENSMUST00000178681 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm23147-201ENSMUST00000178841 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm26095-201ENSMUST00000179270 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm22171-201ENSMUST00000179283 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm23936-201ENSMUST00000179354 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm22619-201ENSMUST00000179516 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm25255-201ENSMUST00000179579 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24755-201ENSMUST00000179691 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm26506-201ENSMUST00000179692 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm25086-201ENSMUST00000179931 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm23243-201ENSMUST00000180047 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24659-201ENSMUST00000180212 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm24169-201ENSMUST00000180244 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm23689-201ENSMUST00000180354 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm27359-201ENSMUST00000184153 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm27785-201ENSMUST00000184268 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm27466-201ENSMUST00000184396 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Gm27703-201ENSMUST00000184836 110 ntBASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc44a1Q6X893 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc44a1Q6X893 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc44a1Q6X893 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms