Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Npc1l1Q6T3U4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm5479-201ENSMUST00000160578 435 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm9726-201ENSMUST00000180321 678 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm27989-201ENSMUST00000184721 107 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm29541-201ENSMUST00000191351 678 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Gm2423-201ENSMUST00000074863 733 ntBASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Npc1l1Q6T3U4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Npc1l1Q6T3U4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Gm13015-201ENSMUST00000118674 204 ntBASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Npc1l1Q6T3U4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Gm8410-201ENSMUST00000117225 605 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Gm25144-201ENSMUST00000179561 110 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Gm25352-201ENSMUST00000179815 110 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Gm6888-201ENSMUST00000221983 706 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Npc1l1Q6T3U4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Gm11424-201ENSMUST00000121929 829 ntBASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Npc1l1Q6T3U4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms