Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Mir6392-201ENSMUST00000184924 108 ntBASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm2451-201ENSMUST00000199447 999 ntBASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Gm10290-201ENSMUST00000200451 999 ntBASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Snrnp40Q6PE01 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snrnp40Q6PE01 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Gm6266-201ENSMUST00000203844 806 ntBASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Mir125a-201ENSMUST00000083545 68 ntBASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.91□□□□□ -0.34
Snrnp40Q6PE01 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snrnp40Q6PE01 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms