Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Gm13365-201ENSMUST00000121188 973 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rtl3Q6P1Y1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm15483-201ENSMUST00000120338 456 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rprl2-201ENSMUST00000157150 290 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm5312-201ENSMUST00000203728 547 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtl3Q6P1Y1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm44335-201ENSMUST00000196879 141 ntBASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm44297-201ENSMUST00000198304 141 ntBASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm44346-201ENSMUST00000198851 141 ntBASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtl3Q6P1Y1 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms