Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Gm10013-201ENSMUST00000106074 672 ntBASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt42Q6IFX2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Gm11950-201ENSMUST00000121615 838 ntBASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Gm44454-201ENSMUST00000198541 138 ntBASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt42Q6IFX2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt42Q6IFX2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Gm4459-201ENSMUST00000118750 468 ntBASIC15.13■□□□□ 0.01
Krt42Q6IFX2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
Krt42Q6IFX2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms