Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Gm42632-201ENSMUST00000201707 2411 ntBASIC11.24□□□□□ -0.61
Zfp248Q640N4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Zfp248Q640N4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.23□□□□□ -0.61
Zfp248Q640N4 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.23□□□□□ -0.61
Zfp248Q640N4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.23□□□□□ -0.61
Zfp248Q640N4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.23□□□□□ -0.61
Zfp248Q640N4 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.23□□□□□ -0.61
Zfp248Q640N4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Zfp248Q640N4 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Gm7153-201ENSMUST00000117092 455 ntBASIC11.22□□□□□ -0.61
Zfp248Q640N4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Gm7862-201ENSMUST00000121461 292 ntBASIC11.22□□□□□ -0.61
Zfp248Q640N4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Mir8098-201ENSMUST00000184011 137 ntBASIC11.22□□□□□ -0.61
Zfp248Q640N4 Gm17971-201ENSMUST00000190239 806 ntBASIC11.22□□□□□ -0.61
Zfp248Q640N4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Gm45167-201ENSMUST00000208007 322 ntBASIC11.22□□□□□ -0.61
Zfp248Q640N4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 AV026068-213ENSMUST00000223675 1171 ntBASIC11.22□□□□□ -0.61
Zfp248Q640N4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Zfp248Q640N4 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Zfp248Q640N4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Zfp248Q640N4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms