Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Gm8318-201ENSMUST00000182954 872 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Gm36982-201ENSMUST00000193796 1128 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 Gm43452-201ENSMUST00000201873 991 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 AC125539.1-202ENSMUST00000226449 670 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Foxc1Q61572 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Foxc1Q61572 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.93□□□□□ -0.66
Foxc1Q61572 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gm11453-201ENSMUST00000117318 1007 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Defa-ps4-201ENSMUST00000118021 183 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gm22993-201ENSMUST00000175423 254 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Gm18595-201ENSMUST00000175736 1068 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC10.92□□□□□ -0.66
Foxc1Q61572 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gm45167-201ENSMUST00000208007 322 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Foxc1Q61572 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gm26226-201ENSMUST00000082509 116 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.92□□□□□ -0.66
Foxc1Q61572 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Foxc1Q61572 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Foxc1Q61572 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Foxc1Q61572 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Foxc1Q61572 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms