Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.34□□□□□ -0.11
Col12a1Q60847 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col12a1Q60847 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.33□□□□□ -0.11
Col12a1Q60847 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.33□□□□□ -0.11
Col12a1Q60847 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.33□□□□□ -0.11
Col12a1Q60847 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.33□□□□□ -0.11
Col12a1Q60847 Gm43758-201ENSMUST00000199500 367 ntBASIC14.33□□□□□ -0.11
Col12a1Q60847 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Col12a1Q60847 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col12a1Q60847 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Gm45865-201ENSMUST00000211815 945 ntBASIC14.33□□□□□ -0.12
Col12a1Q60847 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.33□□□□□ -0.12
Col12a1Q60847 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col12a1Q60847 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.32□□□□□ -0.12
Col12a1Q60847 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Mir877-201ENSMUST00000104738 85 ntBASIC14.32□□□□□ -0.12
Col12a1Q60847 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Gm16177-201ENSMUST00000120728 718 ntBASIC14.32□□□□□ -0.12
Col12a1Q60847 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col12a1Q60847 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.32□□□□□ -0.12
Col12a1Q60847 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.32□□□□□ -0.12
Col12a1Q60847 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col12a1Q60847 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Gm15376-201ENSMUST00000122258 783 ntBASIC14.31□□□□□ -0.12
Col12a1Q60847 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col12a1Q60847 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col12a1Q60847 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Col12a1Q60847 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gm22323-201ENSMUST00000103832 109 ntBASIC14.3□□□□□ -0.12
Col12a1Q60847 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.3□□□□□ -0.12
Col12a1Q60847 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col12a1Q60847 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col12a1Q60847 Gm13689-201ENSMUST00000119360 685 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms