Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
ClpbQ60649 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClpbQ60649 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.18□□□□□ -0.14
ClpbQ60649 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ClpbQ60649 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.17□□□□□ -0.14
ClpbQ60649 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Gm13597-201ENSMUST00000121239 375 ntBASIC14.17□□□□□ -0.14
ClpbQ60649 Gm14822-201ENSMUST00000122247 291 ntBASIC14.17□□□□□ -0.14
ClpbQ60649 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ClpbQ60649 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ClpbQ60649 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
ClpbQ60649 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClpbQ60649 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.17□□□□□ -0.14
ClpbQ60649 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ClpbQ60649 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ClpbQ60649 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ClpbQ60649 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Gm12008-201ENSMUST00000117791 755 ntBASIC14.16□□□□□ -0.14
ClpbQ60649 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Gm44492-201ENSMUST00000197012 141 ntBASIC14.16□□□□□ -0.14
ClpbQ60649 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
ClpbQ60649 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ClpbQ60649 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
ClpbQ60649 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClpbQ60649 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClpbQ60649 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
ClpbQ60649 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ClpbQ60649 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.15□□□□□ -0.14
ClpbQ60649 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.15□□□□□ -0.14
ClpbQ60649 Gm4995-201ENSMUST00000117247 432 ntBASIC14.15□□□□□ -0.14
ClpbQ60649 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClpbQ60649 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.15□□□□□ -0.14
ClpbQ60649 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms