Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Scaf1Q5U4C3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scaf1Q5U4C3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scaf1Q5U4C3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC19.14■□□□□ 0.65
Scaf1Q5U4C3 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Gm14928-201ENSMUST00000120198 477 ntBASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Gm28760-201ENSMUST00000185995 736 ntBASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Gm6180-201ENSMUST00000065243 498 ntBASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Scaf1Q5U4C3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Gm7653-201ENSMUST00000214567 508 ntBASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scaf1Q5U4C3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms