Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-4Q5R1I0 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6d-4Q5R1I0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6d-4Q5R1I0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm22065-201ENSMUST00000103753 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm22066-201ENSMUST00000103761 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24932-201ENSMUST00000103763 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24115-201ENSMUST00000103799 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm22190-201ENSMUST00000103827 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm22191-201ENSMUST00000103831 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24721-201ENSMUST00000103849 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm28018-201ENSMUST00000103869 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm26399-201ENSMUST00000103937 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Mir449b-201ENSMUST00000104833 80 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm13464-201ENSMUST00000119418 935 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm25349-201ENSMUST00000177728 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm23616-201ENSMUST00000177797 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm25871-201ENSMUST00000177816 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24752-201ENSMUST00000178240 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24496-201ENSMUST00000178287 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm25649-201ENSMUST00000178476 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm25548-201ENSMUST00000178681 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm23147-201ENSMUST00000178841 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm26095-201ENSMUST00000179270 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm22171-201ENSMUST00000179283 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm23936-201ENSMUST00000179354 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm22619-201ENSMUST00000179516 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm25255-201ENSMUST00000179579 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24755-201ENSMUST00000179691 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm26506-201ENSMUST00000179692 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm25086-201ENSMUST00000179931 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm23243-201ENSMUST00000180047 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24659-201ENSMUST00000180212 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm24169-201ENSMUST00000180244 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm23689-201ENSMUST00000180354 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm27359-201ENSMUST00000184153 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm27785-201ENSMUST00000184268 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm27466-201ENSMUST00000184396 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm27703-201ENSMUST00000184836 110 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm7774-201ENSMUST00000200064 533 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.39□□□□□ -0.43
Trav6d-4Q5R1I0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-4Q5R1I0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms