Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav8d-2Q5R1B6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.27□□□□□ -0.12
Trav8d-2Q5R1B6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Gm9726-201ENSMUST00000180321 678 ntBASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Gm5356-201ENSMUST00000093326 615 ntBASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav8d-2Q5R1B6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 BC001981-202ENSMUST00000191393 1545 ntBASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Mir1982-201ENSMUST00000157368 74 ntBASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav8d-2Q5R1B6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav8d-2Q5R1B6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms