Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Prpf38aQ4FK66 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf38aQ4FK66 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Prpf38aQ4FK66 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.34
Prpf38aQ4FK66 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.2■□□□□ 0.34
Prpf38aQ4FK66 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm5566-201ENSMUST00000116118 459 ntBASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm7063-201ENSMUST00000186840 981 ntBASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Prpf38aQ4FK66 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gm9182-201ENSMUST00000217829 639 ntBASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Prpf38aQ4FK66 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms