Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc27Q3V036 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc27Q3V036 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Gm13418-201ENSMUST00000119097 944 ntBASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Gm27741-201ENSMUST00000185060 237 ntBASIC18.82■□□□□ 0.6
Ccdc27Q3V036 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Matn2-206ENSMUST00000228570 2798 ntBASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc27Q3V036 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc27Q3V036 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 AC166491.1-201ENSMUST00000227053 2308 ntBASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc27Q3V036 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Gm6089-201ENSMUST00000197666 938 ntBASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Gm30437-201ENSMUST00000206086 1201 ntBASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Ccdc27Q3V036 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms