Protein–RNA interactions for Protein: Q3V009

Tmed1, Transmembrane emp24 domain-containing protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmed1Q3V009 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tmed1Q3V009 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Gm8344-201ENSMUST00000119813 856 ntBASIC14.57□□□□□ -0.08
Tmed1Q3V009 Gm12497-201ENSMUST00000138778 237 ntBASIC14.57□□□□□ -0.08
Tmed1Q3V009 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.57□□□□□ -0.08
Tmed1Q3V009 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.57□□□□□ -0.08
Tmed1Q3V009 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.57□□□□□ -0.08
Tmed1Q3V009 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.57□□□□□ -0.08
Tmed1Q3V009 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.57□□□□□ -0.08
Tmed1Q3V009 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tmed1Q3V009 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.56□□□□□ -0.08
Tmed1Q3V009 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.56□□□□□ -0.08
Tmed1Q3V009 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.56□□□□□ -0.08
Tmed1Q3V009 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tmed1Q3V009 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Efs-202ENSMUST00000227037 2540 ntBASIC14.55□□□□□ -0.08
Tmed1Q3V009 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Tmed1Q3V009 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms