Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Gm22331-201ENSMUST00000158066 136 ntBASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Gm5523-201ENSMUST00000180415 997 ntBASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Gm6983-201ENSMUST00000214912 628 ntBASIC13.46□□□□□ -0.25
Spg11Q3UHA3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Spg11Q3UHA3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Spg11Q3UHA3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm17376-201ENSMUST00000166016 84 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm12241-201ENSMUST00000118330 726 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gm45098-201ENSMUST00000207179 657 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Spg11Q3UHA3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gm6082-201ENSMUST00000215204 454 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gm11524-201ENSMUST00000119349 807 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Proscos-202ENSMUST00000178990 666 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gm4804-201ENSMUST00000182234 999 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Gm18935-201ENSMUST00000212692 664 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Snora73a-201ENSMUST00000082453 205 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Spg11Q3UHA3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gm19078-201ENSMUST00000206311 727 ntBASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Spg11Q3UHA3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms