Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Carlr-201ENSMUST00000181515 2574 ntBASIC17.35■□□□□ 0.37
Limch1Q3UH68 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.35■□□□□ 0.37
Limch1Q3UH68 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Gm44872-201ENSMUST00000207864 420 ntBASIC17.35■□□□□ 0.37
Limch1Q3UH68 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC17.35■□□□□ 0.37
Limch1Q3UH68 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.35■□□□□ 0.37
Limch1Q3UH68 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Limch1Q3UH68 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Gm12134-201ENSMUST00000122109 520 ntBASIC17.34■□□□□ 0.37
Limch1Q3UH68 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Limch1Q3UH68 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Limch1Q3UH68 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.33■□□□□ 0.36
Limch1Q3UH68 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.33■□□□□ 0.36
Limch1Q3UH68 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.33■□□□□ 0.36
Limch1Q3UH68 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.33■□□□□ 0.36
Limch1Q3UH68 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.33■□□□□ 0.36
Limch1Q3UH68 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Limch1Q3UH68 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms