Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ctdnep1Q3TP92 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdnep1Q3TP92 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdnep1Q3TP92 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdnep1Q3TP92 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ctdnep1Q3TP92 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Gm15483-201ENSMUST00000120338 456 ntBASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ctdnep1Q3TP92 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Gm12260-201ENSMUST00000122447 411 ntBASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ctdnep1Q3TP92 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ctdnep1Q3TP92 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gm18206-201ENSMUST00000207027 926 ntBASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gm10175-201ENSMUST00000086013 645 ntBASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ctdnep1Q3TP92 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Gm6226-201ENSMUST00000117765 1146 ntBASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ctdnep1Q3TP92 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms