Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Gm18473-201ENSMUST00000220543 868 ntBASIC20.58■□□□□ 0.89
Trpm1Q2TV84 AC139350.3-201ENSMUST00000226151 420 ntBASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trpm1Q2TV84 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpm1Q2TV84 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trpm1Q2TV84 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpm1Q2TV84 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Trpm1Q2TV84 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trpm1Q2TV84 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Gm13385-201ENSMUST00000121089 220 ntBASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trpm1Q2TV84 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Gm12329-201ENSMUST00000120829 1007 ntBASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trpm1Q2TV84 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 AC168058.1-201ENSMUST00000219521 2282 ntBASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Gm5187-201ENSMUST00000117317 991 ntBASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Gm12485-201ENSMUST00000119641 291 ntBASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Proscos-202ENSMUST00000178990 666 ntBASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trpm1Q2TV84 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trpm1Q2TV84 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm19184-201ENSMUST00000196798 928 ntBASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trpm1Q2TV84 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms