Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Gm5479-201ENSMUST00000160578 435 ntBASIC13.09□□□□□ -0.31
Chd8Q09XV5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Chd8Q09XV5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chd8Q09XV5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Chd8Q09XV5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chd8Q09XV5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Chd8Q09XV5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gm15393-201ENSMUST00000120499 219 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gm25732-201ENSMUST00000175168 60 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gm10608-202ENSMUST00000213924 676 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gm37489-201ENSMUST00000191883 159 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gm18584-201ENSMUST00000203098 964 ntBASIC13.08□□□□□ -0.32
Chd8Q09XV5 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Chd8Q09XV5 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Gm27682-201ENSMUST00000183930 110 ntBASIC13.07□□□□□ -0.32
Chd8Q09XV5 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.07□□□□□ -0.32
Chd8Q09XV5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Chd8Q09XV5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Chd8Q09XV5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.06□□□□□ -0.32
Chd8Q09XV5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms