Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Gm12151-201ENSMUST00000121374 290 ntBASIC14.13□□□□□ -0.15
Hoxc4Q08624 Gm7063-201ENSMUST00000186840 981 ntBASIC14.13□□□□□ -0.15
Hoxc4Q08624 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Dupd1-202ENSMUST00000224735 548 ntBASIC14.13□□□□□ -0.15
Hoxc4Q08624 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc4Q08624 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc4Q08624 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.12□□□□□ -0.15
Hoxc4Q08624 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Gm12428-201ENSMUST00000119844 727 ntBASIC14.12□□□□□ -0.15
Hoxc4Q08624 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc4Q08624 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.11□□□□□ -0.15
Hoxc4Q08624 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Mir6977-201ENSMUST00000184960 64 ntBASIC14.11□□□□□ -0.15
Hoxc4Q08624 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.11□□□□□ -0.15
Hoxc4Q08624 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc4Q08624 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms