Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Gm25990-201ENSMUST00000102440 86 ntBASIC12.29□□□□□ -0.44
Tff1Q08423 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Tff1Q08423 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.29□□□□□ -0.44
Tff1Q08423 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.29□□□□□ -0.44
Tff1Q08423 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm4535-201ENSMUST00000182274 558 ntBASIC12.29□□□□□ -0.44
Tff1Q08423 Gm8318-201ENSMUST00000182954 872 ntBASIC12.29□□□□□ -0.44
Tff1Q08423 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.29□□□□□ -0.44
Tff1Q08423 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm10355-201ENSMUST00000097146 517 ntBASIC12.29□□□□□ -0.44
Tff1Q08423 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tff1Q08423 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tff1Q08423 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tff1Q08423 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.29□□□□□ -0.44
Tff1Q08423 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tff1Q08423 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Carlr-201ENSMUST00000181515 2574 ntBASIC12.28□□□□□ -0.44
Tff1Q08423 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tff1Q08423 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.28□□□□□ -0.44
Tff1Q08423 Gm13418-201ENSMUST00000119097 944 ntBASIC12.28□□□□□ -0.44
Tff1Q08423 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.28□□□□□ -0.44
Tff1Q08423 Gm10499-201ENSMUST00000174094 934 ntBASIC12.28□□□□□ -0.44
Tff1Q08423 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
Tff1Q08423 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.28□□□□□ -0.44
Tff1Q08423 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.28□□□□□ -0.44
Tff1Q08423 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Tff1Q08423 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Tff1Q08423 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.28□□□□□ -0.44
Tff1Q08423 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.28□□□□□ -0.44
Tff1Q08423 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Tff1Q08423 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.27□□□□□ -0.44
Tff1Q08423 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Tff1Q08423 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Tff1Q08423 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tff1Q08423 Gm14494-201ENSMUST00000118786 435 ntBASIC12.27□□□□□ -0.45
Tff1Q08423 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.27□□□□□ -0.45
Tff1Q08423 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.27□□□□□ -0.45
Tff1Q08423 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Tff1Q08423 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Tff1Q08423 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Tff1Q08423 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tff1Q08423 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms