Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm7584-201ENSMUST00000175829 940 ntBASIC10.69□□□□□ -0.7
Hspg2Q05793 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Hspg2Q05793 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hspg2Q05793 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm37714-201ENSMUST00000194742 342 ntBASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.68□□□□□ -0.7
Hspg2Q05793 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Hspg2Q05793 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Mir125a-201ENSMUST00000083545 68 ntBASIC10.67□□□□□ -0.7
Hspg2Q05793 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Gm15782-201ENSMUST00000121073 445 ntBASIC10.67□□□□□ -0.7
Hspg2Q05793 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Gm45098-201ENSMUST00000207179 657 ntBASIC10.67□□□□□ -0.7
Hspg2Q05793 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.67□□□□□ -0.7
Hspg2Q05793 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hspg2Q05793 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.66□□□□□ -0.7
Hspg2Q05793 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hspg2Q05793 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms