Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.42□□□□□ -0.1
Col9a1Q05722 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a1Q05722 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.42□□□□□ -0.1
Col9a1Q05722 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.41□□□□□ -0.1
Col9a1Q05722 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm13216-201ENSMUST00000117145 591 ntBASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.41□□□□□ -0.1
Col9a1Q05722 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.41□□□□□ -0.1
Col9a1Q05722 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm45865-201ENSMUST00000211815 945 ntBASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm18935-201ENSMUST00000212692 664 ntBASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col9a1Q05722 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a1Q05722 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.4□□□□□ -0.1
Col9a1Q05722 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.4□□□□□ -0.1
Col9a1Q05722 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm13813-201ENSMUST00000120998 787 ntBASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.4□□□□□ -0.1
Col9a1Q05722 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Mir5120-201ENSMUST00000175020 78 ntBASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm37002-201ENSMUST00000194560 373 ntBASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm42627-201ENSMUST00000197347 224 ntBASIC14.4□□□□□ -0.1
Col9a1Q05722 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.4□□□□□ -0.1
Col9a1Q05722 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC14.4□□□□□ -0.1
Col9a1Q05722 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a1Q05722 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a1Q05722 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.39□□□□□ -0.11
Col9a1Q05722 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.39□□□□□ -0.11
Col9a1Q05722 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm649-201ENSMUST00000117284 1054 ntBASIC14.39□□□□□ -0.11
Col9a1Q05722 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.39□□□□□ -0.11
Col9a1Q05722 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm45610-201ENSMUST00000209227 784 ntBASIC14.39□□□□□ -0.11
Col9a1Q05722 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.39□□□□□ -0.11
Col9a1Q05722 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.39□□□□□ -0.11
Col9a1Q05722 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a1Q05722 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.38□□□□□ -0.11
Col9a1Q05722 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col9a1Q05722 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms