Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trim43cP86449 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trim43cP86449 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim43cP86449 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.04■□□□□ 0.16
Trim43cP86449 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.04■□□□□ 0.16
Trim43cP86449 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.04■□□□□ 0.16
Trim43cP86449 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trim43cP86449 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trim43cP86449 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trim43cP86449 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trim43cP86449 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim43cP86449 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.03■□□□□ 0.16
Trim43cP86449 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.03■□□□□ 0.16
Trim43cP86449 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trim43cP86449 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trim43cP86449 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trim43cP86449 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim43cP86449 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trim43cP86449 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 Gm12134-201ENSMUST00000122109 520 ntBASIC16.02■□□□□ 0.16
Trim43cP86449 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.02■□□□□ 0.16
Trim43cP86449 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim43cP86449 Gm8000-201ENSMUST00000188378 592 ntBASIC16.02■□□□□ 0.16
Trim43cP86449 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.02■□□□□ 0.16
Trim43cP86449 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trim43cP86449 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trim43cP86449 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim43cP86449 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim43cP86449 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.02■□□□□ 0.15
Trim43cP86449 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trim43cP86449 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trim43cP86449 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim43cP86449 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim43cP86449 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trim43cP86449 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trim43cP86449 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trim43cP86449 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.01■□□□□ 0.15
Trim43cP86449 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.01■□□□□ 0.15
Trim43cP86449 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.01■□□□□ 0.15
Trim43cP86449 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Trim43cP86449 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.01■□□□□ 0.15
Trim43cP86449 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trim43cP86449 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms