Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.16□□□□□ -0.3
SgcbP82349 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SgcbP82349 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SgcbP82349 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.16□□□□□ -0.3
SgcbP82349 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.16□□□□□ -0.3
SgcbP82349 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
SgcbP82349 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SgcbP82349 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Gm11543-201ENSMUST00000120758 370 ntBASIC13.15□□□□□ -0.3
SgcbP82349 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.15□□□□□ -0.3
SgcbP82349 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Gm26308-201ENSMUST00000157768 69 ntBASIC13.15□□□□□ -0.3
SgcbP82349 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SgcbP82349 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.15□□□□□ -0.3
SgcbP82349 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SgcbP82349 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SgcbP82349 BC037039-201ENSMUST00000192003 2205 ntBASIC13.15□□□□□ -0.31
SgcbP82349 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SgcbP82349 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
SgcbP82349 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
SgcbP82349 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SgcbP82349 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SgcbP82349 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.14□□□□□ -0.31
SgcbP82349 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SgcbP82349 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Gm45612-201ENSMUST00000211320 160 ntBASIC13.14□□□□□ -0.31
SgcbP82349 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SgcbP82349 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.14□□□□□ -0.31
SgcbP82349 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SgcbP82349 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SgcbP82349 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SgcbP82349 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SgcbP82349 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.13□□□□□ -0.31
SgcbP82349 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Gm23935-201ENSMUST00000102303 57 ntBASIC13.13□□□□□ -0.31
SgcbP82349 Gm24270-201ENSMUST00000102326 57 ntBASIC13.13□□□□□ -0.31
SgcbP82349 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.13□□□□□ -0.31
SgcbP82349 Gm11745-201ENSMUST00000121669 448 ntBASIC13.13□□□□□ -0.31
SgcbP82349 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.13□□□□□ -0.31
SgcbP82349 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Gm24245-201ENSMUST00000157318 57 ntBASIC13.13□□□□□ -0.31
SgcbP82349 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms