Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Shox2P70390 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Shox2P70390 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Shox2P70390 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Shox2P70390 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Shox2P70390 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.58□□□□□ -0.07
Shox2P70390 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shox2P70390 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Shox2P70390 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Mir770-201ENSMUST00000103252 94 ntBASIC14.58□□□□□ -0.08
Shox2P70390 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.58□□□□□ -0.08
Shox2P70390 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.58□□□□□ -0.08
Shox2P70390 Gm45058-201ENSMUST00000205810 766 ntBASIC14.58□□□□□ -0.08
Shox2P70390 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.58□□□□□ -0.08
Shox2P70390 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shox2P70390 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Shox2P70390 Gm5417-201ENSMUST00000079706 384 ntBASIC14.58□□□□□ -0.08
Shox2P70390 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Shox2P70390 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Shox2P70390 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Shox2P70390 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shox2P70390 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.57□□□□□ -0.08
Shox2P70390 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Shox2P70390 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.57□□□□□ -0.08
Shox2P70390 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.57□□□□□ -0.08
Shox2P70390 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.57□□□□□ -0.08
Shox2P70390 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shox2P70390 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Shox2P70390 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.57□□□□□ -0.08
Shox2P70390 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.57□□□□□ -0.08
Shox2P70390 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Shox2P70390 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Shox2P70390 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.56□□□□□ -0.08
Shox2P70390 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Shox2P70390 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Shox2P70390 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Shox2P70390 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Shox2P70390 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.56□□□□□ -0.08
Shox2P70390 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Shox2P70390 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.56□□□□□ -0.08
Shox2P70390 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Shox2P70390 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Shox2P70390 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Shox2P70390 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms