Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pdlim4P70271 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.29□□□□□ -0.44
Pdlim4P70271 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdlim4P70271 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim4P70271 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim4P70271 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.28□□□□□ -0.44
Pdlim4P70271 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm13597-201ENSMUST00000121239 375 ntBASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm17271-201ENSMUST00000165535 355 ntBASIC12.28□□□□□ -0.44
Pdlim4P70271 Mir3113-201ENSMUST00000175478 76 ntBASIC12.28□□□□□ -0.44
Pdlim4P70271 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim4P70271 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim4P70271 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.27□□□□□ -0.44
Pdlim4P70271 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pdlim4P70271 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim4P70271 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim4P70271 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.27□□□□□ -0.45
Pdlim4P70271 Gm14494-201ENSMUST00000118786 435 ntBASIC12.27□□□□□ -0.45
Pdlim4P70271 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.27□□□□□ -0.45
Pdlim4P70271 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.27□□□□□ -0.45
Pdlim4P70271 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.27□□□□□ -0.45
Pdlim4P70271 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.27□□□□□ -0.45
Pdlim4P70271 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms