Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Ybx1P62960 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.09■□□□□ 0.01
Ybx1P62960 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ybx1P62960 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Gm27838-201ENSMUST00000184829 128 ntBASIC15.09■□□□□ 0.01
Ybx1P62960 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.09■□□□□ 0.01
Ybx1P62960 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ybx1P62960 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.09■□□□□ 0.01
Ybx1P62960 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ybx1P62960 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ybx1P62960 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ybx1P62960 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ybx1P62960 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ybx1P62960 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ybx1P62960 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ybx1P62960 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ybx1P62960 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.08■□□□□ 0
Ybx1P62960 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
Ybx1P62960 Gm15321-201ENSMUST00000121290 288 ntBASIC15.08■□□□□ 0
Ybx1P62960 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Ybx1P62960 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.08■□□□□ 0
Ybx1P62960 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.08■□□□□ 0
Ybx1P62960 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ybx1P62960 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.07■□□□□ 0
Ybx1P62960 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ybx1P62960 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ybx1P62960 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ybx1P62960 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ybx1P62960 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Gm7653-201ENSMUST00000214567 508 ntBASIC15.07■□□□□ 0
Ybx1P62960 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.07■□□□□ 0
Ybx1P62960 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.07■□□□□ 0
Ybx1P62960 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ybx1P62960 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ybx1P62960 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.06■□□□□ 0
Ybx1P62960 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Ybx1P62960 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.06■□□□□ 0
Ybx1P62960 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ybx1P62960 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Ybx1P62960 Mir1897-201ENSMUST00000122581 272 ntBASIC15.06■□□□□ 0
Ybx1P62960 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Gm29667-201ENSMUST00000190817 490 ntBASIC15.06■□□□□ 0
Ybx1P62960 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.06■□□□□ 0
Ybx1P62960 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ybx1P62960 Gm6218-201ENSMUST00000219812 628 ntBASIC15.06■□□□□ 0
Ybx1P62960 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ybx1P62960 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.06■□□□□ 0
Ybx1P62960 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms