Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm5P62322 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Lsm5P62322 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lsm5P62322 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Lsm5P62322 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm5P62322 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.31□□□□□ -0.44
Lsm5P62322 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.31□□□□□ -0.44
Lsm5P62322 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm5P62322 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.31□□□□□ -0.44
Lsm5P62322 Gm19164-201ENSMUST00000210667 640 ntBASIC12.31□□□□□ -0.44
Lsm5P62322 Gm21559-201ENSMUST00000220638 855 ntBASIC12.31□□□□□ -0.44
Lsm5P62322 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Gm8587-201ENSMUST00000076538 843 ntBASIC12.31□□□□□ -0.44
Lsm5P62322 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm5P62322 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Lsm5P62322 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Lsm5P62322 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.31□□□□□ -0.44
Lsm5P62322 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Lsm5P62322 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Lsm5P62322 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Lsm5P62322 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Lsm5P62322 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lsm5P62322 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lsm5P62322 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Lsm5P62322 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.3□□□□□ -0.44
Lsm5P62322 Gm45058-201ENSMUST00000205810 766 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Gm18959-201ENSMUST00000208954 655 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Lsm5P62322 Gm18101-201ENSMUST00000215769 548 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Lsm5P62322 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.3□□□□□ -0.44
Lsm5P62322 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Lsm5P62322 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.3□□□□□ -0.44
Lsm5P62322 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm5P62322 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm5P62322 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm5P62322 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm5P62322 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Matn2-206ENSMUST00000228570 2798 ntBASIC12.29□□□□□ -0.44
Lsm5P62322 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm5P62322 Mir770-201ENSMUST00000103252 94 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms