Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup43P59235 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Nup43P59235 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup43P59235 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.94□□□□□ -0.18
Nup43P59235 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.94□□□□□ -0.18
Nup43P59235 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.94□□□□□ -0.18
Nup43P59235 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.94□□□□□ -0.18
Nup43P59235 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.94□□□□□ -0.18
Nup43P59235 Gm24513-201ENSMUST00000174964 138 ntBASIC13.94□□□□□ -0.18
Nup43P59235 Gm27397-201ENSMUST00000184997 107 ntBASIC13.94□□□□□ -0.18
Nup43P59235 Gm20553-201ENSMUST00000204205 844 ntBASIC13.94□□□□□ -0.18
Nup43P59235 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Nup43P59235 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nup43P59235 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup43P59235 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
Nup43P59235 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nup43P59235 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Nup43P59235 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nup43P59235 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.93□□□□□ -0.18
Nup43P59235 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.93□□□□□ -0.18
Nup43P59235 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.93□□□□□ -0.18
Nup43P59235 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.93□□□□□ -0.18
Nup43P59235 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nup43P59235 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.93□□□□□ -0.18
Nup43P59235 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nup43P59235 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nup43P59235 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.93□□□□□ -0.18
Nup43P59235 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nup43P59235 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.92□□□□□ -0.18
Nup43P59235 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Nup43P59235 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup43P59235 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Nup43P59235 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Gm13464-201ENSMUST00000119418 935 ntBASIC13.92□□□□□ -0.18
Nup43P59235 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup43P59235 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.92□□□□□ -0.18
Nup43P59235 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.92□□□□□ -0.18
Nup43P59235 Gm37935-201ENSMUST00000192012 982 ntBASIC13.92□□□□□ -0.18
Nup43P59235 Gm45612-201ENSMUST00000211320 160 ntBASIC13.92□□□□□ -0.18
Nup43P59235 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.92□□□□□ -0.18
Nup43P59235 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.92□□□□□ -0.18
Nup43P59235 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nup43P59235 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nup43P59235 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms