Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tpm1P58771 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.48■□□□□ 0.23
Tpm1P58771 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.48■□□□□ 0.23
Tpm1P58771 Gm27742-201ENSMUST00000184667 60 ntBASIC16.48■□□□□ 0.23
Tpm1P58771 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.48■□□□□ 0.23
Tpm1P58771 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tpm1P58771 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Tpm1P58771 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.48■□□□□ 0.23
Tpm1P58771 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.48■□□□□ 0.23
Tpm1P58771 Ntrk2-209ENSMUST00000225950 2640 ntBASIC16.48■□□□□ 0.23
Tpm1P58771 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tpm1P58771 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tpm1P58771 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16.47■□□□□ 0.23
Tpm1P58771 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Gm15358-201ENSMUST00000119249 520 ntBASIC16.47■□□□□ 0.23
Tpm1P58771 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tpm1P58771 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.47■□□□□ 0.23
Tpm1P58771 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.47■□□□□ 0.23
Tpm1P58771 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Tpm1P58771 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Tpm1P58771 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tpm1P58771 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Tpm1P58771 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Tpm1P58771 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Tpm1P58771 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Tpm1P58771 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Olfr129-201ENSMUST00000122318 993 ntBASIC16.46■□□□□ 0.23
Tpm1P58771 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.46■□□□□ 0.23
Tpm1P58771 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.46■□□□□ 0.23
Tpm1P58771 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.46■□□□□ 0.23
Tpm1P58771 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Tpm1P58771 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Tpm1P58771 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Tpm1P58771 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Tpm1P58771 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Tpm1P58771 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Tpm1P58771 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms