Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.07■□□□□ 0.48
Tm6sf1P58749 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.07■□□□□ 0.48
Tm6sf1P58749 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.07■□□□□ 0.48
Tm6sf1P58749 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tm6sf1P58749 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Gm18737-201ENSMUST00000173594 937 ntBASIC18.06■□□□□ 0.48
Tm6sf1P58749 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.06■□□□□ 0.48
Tm6sf1P58749 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.06■□□□□ 0.48
Tm6sf1P58749 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Gm14042-201ENSMUST00000120139 833 ntBASIC18.05■□□□□ 0.48
Tm6sf1P58749 Gm14822-201ENSMUST00000122247 291 ntBASIC18.05■□□□□ 0.48
Tm6sf1P58749 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Gm27397-201ENSMUST00000184997 107 ntBASIC18.05■□□□□ 0.48
Tm6sf1P58749 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.05■□□□□ 0.48
Tm6sf1P58749 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Gm6018-201ENSMUST00000216090 1306 ntBASIC18.04■□□□□ 0.48
Tm6sf1P58749 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.04■□□□□ 0.48
Tm6sf1P58749 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Chchd1-203ENSMUST00000224633 557 ntBASIC18.04■□□□□ 0.48
Tm6sf1P58749 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.04■□□□□ 0.48
Tm6sf1P58749 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tm6sf1P58749 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.04■□□□□ 0.48
Tm6sf1P58749 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Gm2756-201ENSMUST00000195851 400 ntBASIC18.03■□□□□ 0.48
Tm6sf1P58749 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.03■□□□□ 0.48
Tm6sf1P58749 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms