Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdh11P55288 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdh11P55288 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cdh11P55288 Gm14722-201ENSMUST00000118943 689 ntBASIC13.47□□□□□ -0.25
Cdh11P55288 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdh11P55288 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.47□□□□□ -0.25
Cdh11P55288 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdh11P55288 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdh11P55288 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.47□□□□□ -0.25
Cdh11P55288 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdh11P55288 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Psmb5-202ENSMUST00000227257 622 ntBASIC13.47□□□□□ -0.25
Cdh11P55288 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Gm5867-201ENSMUST00000063197 592 ntBASIC13.47□□□□□ -0.25
Cdh11P55288 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Cdh11P55288 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdh11P55288 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh11P55288 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Cdh11P55288 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdh11P55288 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdh11P55288 Gm8344-201ENSMUST00000119813 856 ntBASIC13.46□□□□□ -0.25
Cdh11P55288 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdh11P55288 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdh11P55288 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdh11P55288 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdh11P55288 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.46□□□□□ -0.25
Cdh11P55288 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.46□□□□□ -0.25
Cdh11P55288 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.46□□□□□ -0.25
Cdh11P55288 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh11P55288 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh11P55288 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh11P55288 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Cdh11P55288 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Cdh11P55288 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh11P55288 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh11P55288 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.46□□□□□ -0.26
Cdh11P55288 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdh11P55288 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdh11P55288 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdh11P55288 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdh11P55288 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.45□□□□□ -0.26
Cdh11P55288 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdh11P55288 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cdh11P55288 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Gm13036-201ENSMUST00000117799 748 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Gm12260-201ENSMUST00000122447 411 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Cdh11P55288 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.45□□□□□ -0.26
Cdh11P55288 Gm27646-201ENSMUST00000183989 110 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Gm37935-201ENSMUST00000192012 982 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Gm2213-201ENSMUST00000197485 688 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cdh11P55288 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.45□□□□□ -0.26
Cdh11P55288 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdh11P55288 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdh11P55288 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cdh11P55288 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms