Protein–RNA interactions for Protein: P52483

Ube2e3, Ubiquitin-conjugating enzyme E2 E3, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2e3P52483 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ube2e3P52483 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Ube2e3P52483 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube2e3P52483 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube2e3P52483 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube2e3P52483 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ube2e3P52483 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.14□□□□□ -0.15
Ube2e3P52483 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.14□□□□□ -0.15
Ube2e3P52483 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Gm8749-201ENSMUST00000117737 331 ntBASIC14.14□□□□□ -0.15
Ube2e3P52483 Gm13464-201ENSMUST00000119418 935 ntBASIC14.14□□□□□ -0.15
Ube2e3P52483 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Gm18206-201ENSMUST00000207027 926 ntBASIC14.14□□□□□ -0.15
Ube2e3P52483 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.14□□□□□ -0.15
Ube2e3P52483 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube2e3P52483 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube2e3P52483 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.13□□□□□ -0.15
Ube2e3P52483 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.13□□□□□ -0.15
Ube2e3P52483 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.13□□□□□ -0.15
Ube2e3P52483 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.13□□□□□ -0.15
Ube2e3P52483 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.13□□□□□ -0.15
Ube2e3P52483 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube2e3P52483 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ube2e3P52483 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ube2e3P52483 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube2e3P52483 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube2e3P52483 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube2e3P52483 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms