Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.97□□□□□ -0.17
RoraP51448 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.97□□□□□ -0.17
RoraP51448 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RoraP51448 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.97□□□□□ -0.17
RoraP51448 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.97□□□□□ -0.17
RoraP51448 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.97□□□□□ -0.17
RoraP51448 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RoraP51448 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RoraP51448 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RoraP51448 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
RoraP51448 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.96□□□□□ -0.17
RoraP51448 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.96□□□□□ -0.17
RoraP51448 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.96□□□□□ -0.17
RoraP51448 Gm15483-201ENSMUST00000120338 456 ntBASIC13.96□□□□□ -0.17
RoraP51448 Gm22175-201ENSMUST00000175007 78 ntBASIC13.96□□□□□ -0.17
RoraP51448 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.96□□□□□ -0.17
RoraP51448 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.96□□□□□ -0.17
RoraP51448 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.96□□□□□ -0.17
RoraP51448 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.96□□□□□ -0.17
RoraP51448 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RoraP51448 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
RoraP51448 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RoraP51448 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.96□□□□□ -0.18
RoraP51448 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.96□□□□□ -0.18
RoraP51448 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.96□□□□□ -0.18
RoraP51448 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RoraP51448 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RoraP51448 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
RoraP51448 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
RoraP51448 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
RoraP51448 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
RoraP51448 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RoraP51448 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
RoraP51448 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.95□□□□□ -0.18
RoraP51448 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.95□□□□□ -0.18
RoraP51448 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.95□□□□□ -0.18
RoraP51448 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
RoraP51448 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RoraP51448 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RoraP51448 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
RoraP51448 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RoraP51448 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RoraP51448 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RoraP51448 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RoraP51448 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms