Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Ercc3P49135 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ercc3P49135 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.52■□□□□ 0.4
Ercc3P49135 Gm6736-201ENSMUST00000166583 948 ntBASIC17.52■□□□□ 0.4
Ercc3P49135 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.52■□□□□ 0.4
Ercc3P49135 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ercc3P49135 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ercc3P49135 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.52■□□□□ 0.4
Ercc3P49135 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ercc3P49135 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.52■□□□□ 0.39
Ercc3P49135 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Ercc3P49135 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc3P49135 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc3P49135 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc3P49135 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ercc3P49135 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.52■□□□□ 0.39
Ercc3P49135 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ercc3P49135 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Ercc3P49135 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.51■□□□□ 0.39
Ercc3P49135 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.51■□□□□ 0.39
Ercc3P49135 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.51■□□□□ 0.39
Ercc3P49135 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.51■□□□□ 0.39
Ercc3P49135 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.51■□□□□ 0.39
Ercc3P49135 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.51■□□□□ 0.39
Ercc3P49135 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Ercc3P49135 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.51■□□□□ 0.39
Ercc3P49135 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.51■□□□□ 0.39
Ercc3P49135 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ercc3P49135 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.51■□□□□ 0.39
Ercc3P49135 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
Ercc3P49135 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.51■□□□□ 0.39
Ercc3P49135 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ercc3P49135 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.51■□□□□ 0.39
Ercc3P49135 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ercc3P49135 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.5■□□□□ 0.39
Ercc3P49135 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.5■□□□□ 0.39
Ercc3P49135 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.5■□□□□ 0.39
Ercc3P49135 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
Ercc3P49135 Chchd1-203ENSMUST00000224633 557 ntBASIC17.5■□□□□ 0.39
Ercc3P49135 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ercc3P49135 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.5■□□□□ 0.39
Ercc3P49135 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.5■□□□□ 0.39
Ercc3P49135 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.5■□□□□ 0.39
Ercc3P49135 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ercc3P49135 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ercc3P49135 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ercc3P49135 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ercc3P49135 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms