Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.31■□□□□ 0.2
Brca1P48754 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Brca1P48754 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.31■□□□□ 0.2
Brca1P48754 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Brca1P48754 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.3■□□□□ 0.2
Brca1P48754 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Brca1P48754 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.3■□□□□ 0.2
Brca1P48754 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Brca1P48754 Gm12882-201ENSMUST00000121696 517 ntBASIC16.3■□□□□ 0.2
Brca1P48754 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Brca1P48754 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Brca1P48754 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Brca1P48754 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Brca1P48754 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.29■□□□□ 0.2
Brca1P48754 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.29■□□□□ 0.2
Brca1P48754 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.29■□□□□ 0.2
Brca1P48754 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.29■□□□□ 0.2
Brca1P48754 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.29■□□□□ 0.2
Brca1P48754 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Brca1P48754 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.29■□□□□ 0.2
Brca1P48754 Gm24196-201ENSMUST00000179161 110 ntBASIC16.29■□□□□ 0.2
Brca1P48754 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Brca1P48754 Gm17795-201ENSMUST00000214505 757 ntBASIC16.29■□□□□ 0.2
Brca1P48754 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC16.29■□□□□ 0.2
Brca1P48754 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.29■□□□□ 0.2
Brca1P48754 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.28■□□□□ 0.2
Brca1P48754 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca1P48754 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca1P48754 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Gm14723-201ENSMUST00000118686 215 ntBASIC16.28■□□□□ 0.2
Brca1P48754 Gm11524-201ENSMUST00000119349 807 ntBASIC16.28■□□□□ 0.2
Brca1P48754 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.28■□□□□ 0.2
Brca1P48754 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Gm7619-201ENSMUST00000210649 1282 ntBASIC16.28■□□□□ 0.2
Brca1P48754 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.28■□□□□ 0.2
Brca1P48754 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Brca1P48754 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Brca1P48754 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Brca1P48754 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Gm15957-201ENSMUST00000118893 974 ntBASIC16.27■□□□□ 0.2
Brca1P48754 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Brca1P48754 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms