Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
GdnfP48540 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
GdnfP48540 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.96□□□□□ -0.33
GdnfP48540 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.96□□□□□ -0.33
GdnfP48540 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.96□□□□□ -0.33
GdnfP48540 Gm8655-201ENSMUST00000221159 852 ntBASIC12.96□□□□□ -0.33
GdnfP48540 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.96□□□□□ -0.33
GdnfP48540 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
GdnfP48540 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.96□□□□□ -0.34
GdnfP48540 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
GdnfP48540 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
GdnfP48540 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.95□□□□□ -0.34
GdnfP48540 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GdnfP48540 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.95□□□□□ -0.34
GdnfP48540 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.95□□□□□ -0.34
GdnfP48540 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.95□□□□□ -0.34
GdnfP48540 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.95□□□□□ -0.34
GdnfP48540 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.95□□□□□ -0.34
GdnfP48540 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GdnfP48540 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GdnfP48540 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
GdnfP48540 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GdnfP48540 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.94□□□□□ -0.34
GdnfP48540 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Gm7153-201ENSMUST00000117092 455 ntBASIC12.94□□□□□ -0.34
GdnfP48540 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.94□□□□□ -0.34
GdnfP48540 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.94□□□□□ -0.34
GdnfP48540 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.94□□□□□ -0.34
GdnfP48540 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GdnfP48540 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GdnfP48540 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.93□□□□□ -0.34
GdnfP48540 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.93□□□□□ -0.34
GdnfP48540 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.93□□□□□ -0.34
GdnfP48540 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.93□□□□□ -0.34
GdnfP48540 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.93□□□□□ -0.34
GdnfP48540 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
GdnfP48540 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GdnfP48540 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms